Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC25.1■■□□□ 1.61
SBNO1A3KN83 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
SBNO1A3KN83 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SBNO1A3KN83 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SBNO1A3KN83 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 THAP5-204ENST00000438865 868 ntTSL 2 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 ANKRD20A8P-203ENST00000641373 517 ntBASIC25.09■■□□□ 1.61
SBNO1A3KN83 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SBNO1A3KN83 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SBNO1A3KN83 KRT8P50-201ENST00000562022 1438 ntBASIC25.09■■□□□ 1.61
SBNO1A3KN83 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
SBNO1A3KN83 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SBNO1A3KN83 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SBNO1A3KN83 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SBNO1A3KN83 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SBNO1A3KN83 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC25.08■■□□□ 1.61
SBNO1A3KN83 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SBNO1A3KN83 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC25.08■■□□□ 1.61
SBNO1A3KN83 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SBNO1A3KN83 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SBNO1A3KN83 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SBNO1A3KN83 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SBNO1A3KN83 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC25.08■■□□□ 1.61
SBNO1A3KN83 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
SBNO1A3KN83 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SBNO1A3KN83 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SBNO1A3KN83 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SBNO1A3KN83 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SBNO1A3KN83 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SBNO1A3KN83 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SBNO1A3KN83 FP475955.4-201ENST00000623131 1990 ntBASIC25.08■■□□□ 1.6
SBNO1A3KN83 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC25.08■■□□□ 1.6
SBNO1A3KN83 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SBNO1A3KN83 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
SBNO1A3KN83 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SBNO1A3KN83 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SBNO1A3KN83 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC25.07■■□□□ 1.6
SBNO1A3KN83 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC25.07■■□□□ 1.6
SBNO1A3KN83 AC005104.2-201ENST00000427818 678 ntBASIC25.07■■□□□ 1.6
SBNO1A3KN83 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC25.07■■□□□ 1.6
SBNO1A3KN83 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC25.07■■□□□ 1.6
SBNO1A3KN83 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC25.07■■□□□ 1.6
SBNO1A3KN83 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC25.07■■□□□ 1.6
SBNO1A3KN83 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SBNO1A3KN83 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC25.07■■□□□ 1.6
SBNO1A3KN83 AC116407.3-201ENST00000623905 1129 ntBASIC25.07■■□□□ 1.6
SBNO1A3KN83 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC25.07■■□□□ 1.6
SBNO1A3KN83 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SBNO1A3KN83 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SBNO1A3KN83 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
SBNO1A3KN83 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SBNO1A3KN83 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SBNO1A3KN83 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
SBNO1A3KN83 RCN1P2-201ENST00000398357 915 ntBASIC25.06■■□□□ 1.6
SBNO1A3KN83 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
SBNO1A3KN83 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC25.06■■□□□ 1.6
SBNO1A3KN83 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC25.06■■□□□ 1.6
SBNO1A3KN83 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC25.06■■□□□ 1.6
SBNO1A3KN83 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC25.06■■□□□ 1.6
SBNO1A3KN83 Z98044.1-201ENST00000632503 1764 ntBASIC25.06■■□□□ 1.6
SBNO1A3KN83 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SBNO1A3KN83 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SBNO1A3KN83 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC25.06■■□□□ 1.6
SBNO1A3KN83 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC25.06■■□□□ 1.6
SBNO1A3KN83 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SBNO1A3KN83 PAN3-AS1-201ENST00000563843 1351 ntBASIC25.06■■□□□ 1.6
SBNO1A3KN83 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SBNO1A3KN83 AC113404.2-201ENST00000507884 177 ntBASIC25.05■■□□□ 1.6
SBNO1A3KN83 IGHV3-22-201ENST00000520721 359 ntBASIC25.05■■□□□ 1.6
SBNO1A3KN83 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC25.05■■□□□ 1.6
SBNO1A3KN83 GZMM-202ENST00000592501 941 ntTSL 3 BASIC25.05■■□□□ 1.6
SBNO1A3KN83 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC25.05■■□□□ 1.6
SBNO1A3KN83 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SBNO1A3KN83 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SBNO1A3KN83 AL158211.5-201ENST00000623583 2518 ntBASIC25.05■■□□□ 1.6
SBNO1A3KN83 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SBNO1A3KN83 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms