Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.37□□□□□ -0.43
LITAFQ99732 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LITAFQ99732 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC12.37□□□□□ -0.43
LITAFQ99732 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC12.37□□□□□ -0.43
LITAFQ99732 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC12.37□□□□□ -0.43
LITAFQ99732 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC12.37□□□□□ -0.43
LITAFQ99732 KRT18P61-201ENST00000585825 1298 ntBASIC12.37□□□□□ -0.43
LITAFQ99732 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC12.37□□□□□ -0.43
LITAFQ99732 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.37□□□□□ -0.43
LITAFQ99732 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LITAFQ99732 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.37□□□□□ -0.43
LITAFQ99732 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.37□□□□□ -0.43
LITAFQ99732 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
LITAFQ99732 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.37□□□□□ -0.43
LITAFQ99732 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.37□□□□□ -0.43
LITAFQ99732 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LITAFQ99732 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.37□□□□□ -0.43
LITAFQ99732 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LITAFQ99732 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 PCDH8P1-201ENST00000428983 2773 ntBASIC12.36□□□□□ -0.43
LITAFQ99732 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LITAFQ99732 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.36□□□□□ -0.43
LITAFQ99732 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
LITAFQ99732 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
LITAFQ99732 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.36□□□□□ -0.43
LITAFQ99732 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LITAFQ99732 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LITAFQ99732 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LITAFQ99732 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC12.36□□□□□ -0.43
LITAFQ99732 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC12.36□□□□□ -0.43
LITAFQ99732 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
LITAFQ99732 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LITAFQ99732 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.35□□□□□ -0.43
LITAFQ99732 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.35□□□□□ -0.43
LITAFQ99732 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.35□□□□□ -0.43
LITAFQ99732 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LITAFQ99732 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LITAFQ99732 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LITAFQ99732 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LITAFQ99732 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 SUDS3P1-201ENST00000505831 966 ntBASIC12.35□□□□□ -0.43
LITAFQ99732 KRT18P16-201ENST00000510337 1294 ntBASIC12.35□□□□□ -0.43
LITAFQ99732 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LITAFQ99732 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC12.35□□□□□ -0.43
LITAFQ99732 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
LITAFQ99732 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.35□□□□□ -0.43
LITAFQ99732 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.35□□□□□ -0.43
LITAFQ99732 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
LITAFQ99732 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LITAFQ99732 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms