Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb3Q91XZ7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Gm10013-201ENSMUST00000106074 672 ntBASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Mir5130-201ENSMUST00000175160 84 ntBASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Gm21156-201ENSMUST00000189693 869 ntBASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb3Q91XZ7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Gm13474-201ENSMUST00000122466 815 ntBASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Gm7791-201ENSMUST00000219066 539 ntBASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb3Q91XZ7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb3Q91XZ7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms