Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cd109Q8R422 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cd109Q8R422 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cd109Q8R422 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC22.11■■□□□ 1.13
Cd109Q8R422 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC22.11■■□□□ 1.13
Cd109Q8R422 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Cd109Q8R422 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC22.11■■□□□ 1.13
Cd109Q8R422 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC22.11■■□□□ 1.13
Cd109Q8R422 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cd109Q8R422 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Cd109Q8R422 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Cd109Q8R422 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Cd109Q8R422 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Cd109Q8R422 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC22.1■■□□□ 1.13
Cd109Q8R422 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC22.1■■□□□ 1.13
Cd109Q8R422 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC22.1■■□□□ 1.13
Cd109Q8R422 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC22.1■■□□□ 1.13
Cd109Q8R422 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Cd109Q8R422 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Cd109Q8R422 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cd109Q8R422 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC22.09■■□□□ 1.13
Cd109Q8R422 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC22.09■■□□□ 1.13
Cd109Q8R422 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC22.09■■□□□ 1.13
Cd109Q8R422 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC22.09■■□□□ 1.13
Cd109Q8R422 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC22.09■■□□□ 1.13
Cd109Q8R422 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC22.09■■□□□ 1.13
Cd109Q8R422 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
Cd109Q8R422 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Cd109Q8R422 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Cd109Q8R422 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cd109Q8R422 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC22.09■■□□□ 1.13
Cd109Q8R422 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cd109Q8R422 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cd109Q8R422 Nudt18-203ENSMUST00000228768 1578 ntBASIC22.08■■□□□ 1.13
Cd109Q8R422 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cd109Q8R422 AC126250.1-201ENSMUST00000228343 1768 ntBASIC22.08■■□□□ 1.13
Cd109Q8R422 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cd109Q8R422 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cd109Q8R422 Gm25948-201ENSMUST00000175334 112 ntBASIC22.08■■□□□ 1.13
Cd109Q8R422 Gm2272-201ENSMUST00000194903 582 ntBASIC22.08■■□□□ 1.13
Cd109Q8R422 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cd109Q8R422 CT025626.1-201ENSMUST00000223735 1455 ntBASIC22.08■■□□□ 1.13
Cd109Q8R422 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cd109Q8R422 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cd109Q8R422 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cd109Q8R422 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cd109Q8R422 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cd109Q8R422 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cd109Q8R422 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cd109Q8R422 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC22.07■■□□□ 1.12
Cd109Q8R422 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Cd109Q8R422 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Cd109Q8R422 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC22.07■■□□□ 1.12
Cd109Q8R422 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Cd109Q8R422 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cd109Q8R422 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Cd109Q8R422 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC22.07■■□□□ 1.12
Cd109Q8R422 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms