Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMC5Q8IY18 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC23.01■■□□□ 1.27
SMC5Q8IY18 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC23■■□□□ 1.27
SMC5Q8IY18 UNC93B2-201ENST00000285383 730 ntBASIC23■■□□□ 1.27
SMC5Q8IY18 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23■■□□□ 1.27
SMC5Q8IY18 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23■■□□□ 1.27
SMC5Q8IY18 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 AP000525.1-201ENST00000608286 694 ntBASIC23■■□□□ 1.27
SMC5Q8IY18 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23■■□□□ 1.27
SMC5Q8IY18 TMEM191A-211ENST00000637163 1067 ntBASIC23■■□□□ 1.27
SMC5Q8IY18 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23■■□□□ 1.27
SMC5Q8IY18 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23■■□□□ 1.27
SMC5Q8IY18 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC5Q8IY18 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC5Q8IY18 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 WWOX-216ENST00000569818 525 ntBASIC22.99■■□□□ 1.27
SMC5Q8IY18 MIR4785-201ENST00000585005 73 ntBASIC22.99■■□□□ 1.27
SMC5Q8IY18 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMC5Q8IY18 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC5Q8IY18 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 SDHAP2-201ENST00000455183 2001 ntBASIC22.99■■□□□ 1.27
SMC5Q8IY18 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC5Q8IY18 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMC5Q8IY18 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.99■■□□□ 1.27
SMC5Q8IY18 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.98■■□□□ 1.27
SMC5Q8IY18 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC5Q8IY18 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC5Q8IY18 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 AL390955.1-201ENST00000428694 934 ntBASIC22.98■■□□□ 1.27
SMC5Q8IY18 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 TSPY17P-201ENST00000450329 467 ntBASIC22.98■■□□□ 1.27
SMC5Q8IY18 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 CR769767.2-201ENST00000622735 460 ntBASIC22.98■■□□□ 1.27
SMC5Q8IY18 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC5Q8IY18 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMC5Q8IY18 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC5Q8IY18 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMC5Q8IY18 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.98■■□□□ 1.27
SMC5Q8IY18 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 AC005332.8-201ENST00000622750 2735 ntBASIC22.97■■□□□ 1.27
SMC5Q8IY18 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 MIR718-201ENST00000390190 70 ntBASIC22.97■■□□□ 1.27
SMC5Q8IY18 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 NAT14-202ENST00000587400 416 ntTSL 5 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 AL163051.1-201ENST00000569214 1512 ntBASIC22.97■■□□□ 1.27
SMC5Q8IY18 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.97■■□□□ 1.27
SMC5Q8IY18 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMC5Q8IY18 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms