Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC068472.1-201ENST00000474589 881 ntBASIC23.36■■□□□ 1.33
RC3H1Q5TC82 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 AC008687.5-201ENST00000593746 558 ntBASIC23.36■■□□□ 1.33
RC3H1Q5TC82 AC116407.3-201ENST00000623905 1129 ntBASIC23.36■■□□□ 1.33
RC3H1Q5TC82 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 ZNF259P1-201ENST00000407656 1365 ntBASIC23.36■■□□□ 1.33
RC3H1Q5TC82 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.35■■□□□ 1.33
RC3H1Q5TC82 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 MED16-201ENST00000269814 1199 ntTSL 5 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 BX842568.4-201ENST00000421222 227 ntBASIC23.35■■□□□ 1.33
RC3H1Q5TC82 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 MTDHP3-201ENST00000594186 672 ntBASIC23.35■■□□□ 1.33
RC3H1Q5TC82 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H1Q5TC82 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 AC112777.1-201ENST00000540175 1423 ntBASIC23.34■■□□□ 1.33
RC3H1Q5TC82 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 MTMR9LP-203ENST00000426597 1545 ntBASIC23.34■■□□□ 1.33
RC3H1Q5TC82 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RC3H1Q5TC82 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 DANCR-204ENST00000444958 709 ntTSL 3 BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 AC145285.3-201ENST00000564603 959 ntBASIC23.33■■□□□ 1.33
RC3H1Q5TC82 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 AP001269.4-201ENST00000609611 512 ntBASIC23.33■■□□□ 1.33
RC3H1Q5TC82 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H1Q5TC82 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RC3H1Q5TC82 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.32
RC3H1Q5TC82 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RC3H1Q5TC82 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
RC3H1Q5TC82 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.33■■□□□ 1.32
RC3H1Q5TC82 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.33■■□□□ 1.32
RC3H1Q5TC82 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 RPS2P28-201ENST00000314255 741 ntBASIC23.32■■□□□ 1.32
RC3H1Q5TC82 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 PGAM5P1-201ENST00000518923 814 ntBASIC23.32■■□□□ 1.32
RC3H1Q5TC82 AC009533.2-201ENST00000543664 586 ntBASIC23.32■■□□□ 1.32
RC3H1Q5TC82 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.32■■□□□ 1.32
RC3H1Q5TC82 INTS4P1-201ENST00000438455 1935 ntBASIC23.31■■□□□ 1.32
RC3H1Q5TC82 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.31■■□□□ 1.32
RC3H1Q5TC82 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms