Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
NOBOXO60393 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOBOXO60393 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NOBOXO60393 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NOBOXO60393 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.39■□□□□ 0.54
NOBOXO60393 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NOBOXO60393 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.39■□□□□ 0.53
NOBOXO60393 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NOBOXO60393 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.39■□□□□ 0.53
NOBOXO60393 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.39■□□□□ 0.53
NOBOXO60393 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 STARP1-201ENST00000397973 869 ntBASIC18.39■□□□□ 0.53
NOBOXO60393 AL023284.2-201ENST00000405850 579 ntBASIC18.39■□□□□ 0.53
NOBOXO60393 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.39■□□□□ 0.53
NOBOXO60393 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
NOBOXO60393 KRT18P56-201ENST00000507275 550 ntBASIC18.39■□□□□ 0.53
NOBOXO60393 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.39■□□□□ 0.53
NOBOXO60393 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.39■□□□□ 0.53
NOBOXO60393 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NOBOXO60393 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
NOBOXO60393 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
NOBOXO60393 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NOBOXO60393 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.39■□□□□ 0.53
NOBOXO60393 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.39■□□□□ 0.53
NOBOXO60393 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NOBOXO60393 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.38■□□□□ 0.53
NOBOXO60393 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.38■□□□□ 0.53
NOBOXO60393 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NOBOXO60393 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NOBOXO60393 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.38■□□□□ 0.53
NOBOXO60393 AC112907.2-201ENST00000448639 330 ntBASIC18.38■□□□□ 0.53
NOBOXO60393 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NOBOXO60393 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.38■□□□□ 0.53
NOBOXO60393 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.38■□□□□ 0.53
NOBOXO60393 HYMAI.1-201ENST00000620949 238 ntBASIC18.38■□□□□ 0.53
NOBOXO60393 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NOBOXO60393 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NOBOXO60393 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
NOBOXO60393 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NOBOXO60393 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.38■□□□□ 0.53
NOBOXO60393 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.38■□□□□ 0.53
NOBOXO60393 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
NOBOXO60393 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NOBOXO60393 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NOBOXO60393 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.37■□□□□ 0.53
NOBOXO60393 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 LETM1P2-201ENST00000597330 2178 ntBASIC18.37■□□□□ 0.53
NOBOXO60393 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.37■□□□□ 0.53
NOBOXO60393 SPDYE15P-201ENST00000424157 909 ntBASIC18.37■□□□□ 0.53
NOBOXO60393 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NOBOXO60393 KRT126P-201ENST00000549467 1181 ntBASIC18.37■□□□□ 0.53
NOBOXO60393 AL121894.2-201ENST00000602977 491 ntBASIC18.37■□□□□ 0.53
NOBOXO60393 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NOBOXO60393 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.37■□□□□ 0.53
NOBOXO60393 KRT8P3-201ENST00000519669 1449 ntBASIC18.37■□□□□ 0.53
NOBOXO60393 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NOBOXO60393 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NOBOXO60393 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.37■□□□□ 0.53
NOBOXO60393 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOBOXO60393 AC005082.1-201ENST00000413042 2259 ntBASIC18.37■□□□□ 0.53
NOBOXO60393 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NOBOXO60393 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.36■□□□□ 0.53
NOBOXO60393 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms