Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccr6O54689 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccr6O54689 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.23□□□□□ -0.29
Ccr6O54689 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.22□□□□□ -0.29
Ccr6O54689 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ccr6O54689 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccr6O54689 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Ccr6O54689 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ccr6O54689 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ccr6O54689 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ccr6O54689 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.22□□□□□ -0.29
Ccr6O54689 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.22□□□□□ -0.29
Ccr6O54689 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.22□□□□□ -0.29
Ccr6O54689 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccr6O54689 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ccr6O54689 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
Ccr6O54689 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccr6O54689 Gm12933-201ENSMUST00000120203 872 ntBASIC13.21□□□□□ -0.29
Ccr6O54689 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ccr6O54689 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.21□□□□□ -0.29
Ccr6O54689 Gm27275-201ENSMUST00000184318 272 ntBASIC13.21□□□□□ -0.29
Ccr6O54689 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Gm29707-201ENSMUST00000196325 491 ntBASIC13.21□□□□□ -0.29
Ccr6O54689 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccr6O54689 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Ccr6O54689 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccr6O54689 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ccr6O54689 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccr6O54689 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccr6O54689 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccr6O54689 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccr6O54689 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccr6O54689 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccr6O54689 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ccr6O54689 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccr6O54689 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ccr6O54689 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccr6O54689 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Ccr6O54689 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Gm42569-201ENSMUST00000200539 472 ntBASIC13.2□□□□□ -0.3
Ccr6O54689 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccr6O54689 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccr6O54689 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Ccr6O54689 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccr6O54689 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccr6O54689 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccr6O54689 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccr6O54689 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccr6O54689 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms