Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 MIR3180-4-201ENST00000582223 153 ntBASIC19.7■□□□□ 0.74
CHD7Q9P2D1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD7Q9P2D1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.69■□□□□ 0.74
CHD7Q9P2D1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD7Q9P2D1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD7Q9P2D1 AC093909.1-201ENST00000504731 1122 ntBASIC19.69■□□□□ 0.74
CHD7Q9P2D1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.69■□□□□ 0.74
CHD7Q9P2D1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHD7Q9P2D1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD7Q9P2D1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD7Q9P2D1 ZNF259P1-201ENST00000407656 1365 ntBASIC19.69■□□□□ 0.74
CHD7Q9P2D1 AC034236.2-201ENST00000606662 1610 ntBASIC19.68■□□□□ 0.74
CHD7Q9P2D1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.68■□□□□ 0.74
CHD7Q9P2D1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 AC125437.2-201ENST00000625180 2167 ntBASIC19.68■□□□□ 0.74
CHD7Q9P2D1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD7Q9P2D1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 AC004832.2-201ENST00000426397 482 ntBASIC19.67■□□□□ 0.74
CHD7Q9P2D1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 RFPL4AP1-201ENST00000530883 850 ntBASIC19.67■□□□□ 0.74
CHD7Q9P2D1 MIR3197-201ENST00000582241 73 ntBASIC19.67■□□□□ 0.74
CHD7Q9P2D1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CHD7Q9P2D1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 RBM17P3-201ENST00000417687 1192 ntBASIC19.66■□□□□ 0.74
CHD7Q9P2D1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 AP005117.1-201ENST00000584346 1413 ntBASIC19.66■□□□□ 0.74
CHD7Q9P2D1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 AC112482.1-201ENST00000492080 688 ntBASIC19.66■□□□□ 0.74
CHD7Q9P2D1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD7Q9P2D1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.65■□□□□ 0.74
CHD7Q9P2D1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms