Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 VN1R11P-201ENST00000407795 868 ntBASIC20.66■□□□□ 0.9
RNF39Q9H2S5 TSPY5P-201ENST00000426936 936 ntBASIC20.66■□□□□ 0.9
RNF39Q9H2S5 MTND1P1-201ENST00000445453 368 ntBASIC20.66■□□□□ 0.9
RNF39Q9H2S5 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 AC087388.1-201ENST00000571370 1112 ntBASIC20.66■□□□□ 0.9
RNF39Q9H2S5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 AP002371.2-201ENST00000624450 503 ntBASIC20.66■□□□□ 0.9
RNF39Q9H2S5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.66■□□□□ 0.9
RNF39Q9H2S5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 AL158211.5-201ENST00000623583 2518 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 AC006511.2-201ENST00000388966 660 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 AC022028.1-201ENST00000412054 408 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 HSFY7P-201ENST00000432672 318 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 TSPY21P-201ENST00000433481 731 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 HSFY8P-201ENST00000437934 318 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 CT45A11P-201ENST00000448043 1134 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 HSFY5P-201ENST00000453726 309 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 AC021269.1-201ENST00000526860 705 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 AC096586.1-201ENST00000610267 561 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 AL023973.1-201ENST00000624619 620 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 AFG3L1P-217ENST00000557444 2447 ntBASIC20.65■□□□□ 0.9
RNF39Q9H2S5 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF39Q9H2S5 Z82202.1-201ENST00000623446 1880 ntBASIC20.64■□□□□ 0.9
RNF39Q9H2S5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF39Q9H2S5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF39Q9H2S5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF39Q9H2S5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 FAM220BP-201ENST00000377689 816 ntBASIC20.64■□□□□ 0.89
RNF39Q9H2S5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 MTND3P4-201ENST00000453537 303 ntBASIC20.64■□□□□ 0.89
RNF39Q9H2S5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AL441883.1-201ENST00000566170 1045 ntBASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 MTATP6P25-201ENST00000574491 261 ntBASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AL162390.1-201ENST00000622201 1246 ntBASIC20.64■□□□□ 0.89
RNF39Q9H2S5 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 CBWD3-206ENST00000478048 1736 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RNF39Q9H2S5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 AC008549.2-201ENST00000333482 706 ntBASIC20.63■□□□□ 0.89
RNF39Q9H2S5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.63■□□□□ 0.89
RNF39Q9H2S5 FAM8A6P-201ENST00000407496 1135 ntBASIC20.63■□□□□ 0.89
RNF39Q9H2S5 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms