Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNED1Q8TER0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SNED1Q8TER0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.63■■□□□ 1.21
SNED1Q8TER0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SNED1Q8TER0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.63■■□□□ 1.21
SNED1Q8TER0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.63■■□□□ 1.21
SNED1Q8TER0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.63■■□□□ 1.21
SNED1Q8TER0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNED1Q8TER0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.63■■□□□ 1.21
SNED1Q8TER0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNED1Q8TER0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNED1Q8TER0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNED1Q8TER0 KRT8P50-201ENST00000562022 1438 ntBASIC22.62■■□□□ 1.21
SNED1Q8TER0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNED1Q8TER0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
SNED1Q8TER0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNED1Q8TER0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.62■■□□□ 1.21
SNED1Q8TER0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SNED1Q8TER0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNED1Q8TER0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.62■■□□□ 1.21
SNED1Q8TER0 AC092183.1-201ENST00000469884 875 ntBASIC22.62■■□□□ 1.21
SNED1Q8TER0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC22.62■■□□□ 1.21
SNED1Q8TER0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.62■■□□□ 1.21
SNED1Q8TER0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SNED1Q8TER0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.62■■□□□ 1.21
SNED1Q8TER0 FEM1AP3-201ENST00000403722 1741 ntBASIC22.62■■□□□ 1.21
SNED1Q8TER0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNED1Q8TER0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNED1Q8TER0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.62■■□□□ 1.21
SNED1Q8TER0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNED1Q8TER0 PCDHAC2-203ENST00000615316 3011 ntBASIC22.61■■□□□ 1.21
SNED1Q8TER0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNED1Q8TER0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.61■■□□□ 1.21
SNED1Q8TER0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SNED1Q8TER0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.61■■□□□ 1.21
SNED1Q8TER0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SNED1Q8TER0 FGFR3P6-201ENST00000457012 610 ntBASIC22.61■■□□□ 1.21
SNED1Q8TER0 POLD2P1-201ENST00000511220 997 ntBASIC22.61■■□□□ 1.21
SNED1Q8TER0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.61■■□□□ 1.21
SNED1Q8TER0 AC008608.2-201ENST00000606089 416 ntBASIC22.61■■□□□ 1.21
SNED1Q8TER0 IRX1P1-201ENST00000438849 1838 ntBASIC22.61■■□□□ 1.21
SNED1Q8TER0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.61■■□□□ 1.21
SNED1Q8TER0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNED1Q8TER0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.61■■□□□ 1.21
SNED1Q8TER0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNED1Q8TER0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
SNED1Q8TER0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SNED1Q8TER0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNED1Q8TER0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNED1Q8TER0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNED1Q8TER0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNED1Q8TER0 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.6■■□□□ 1.21
SNED1Q8TER0 AL357033.4-201ENST00000617703 1807 ntBASIC22.6■■□□□ 1.21
SNED1Q8TER0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNED1Q8TER0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNED1Q8TER0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.6■■□□□ 1.21
SNED1Q8TER0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
SNED1Q8TER0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.6■■□□□ 1.21
SNED1Q8TER0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.6■■□□□ 1.21
SNED1Q8TER0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC22.6■■□□□ 1.21
SNED1Q8TER0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC22.6■■□□□ 1.21
SNED1Q8TER0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.6■■□□□ 1.21
SNED1Q8TER0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNED1Q8TER0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNED1Q8TER0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNED1Q8TER0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNED1Q8TER0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.6■■□□□ 1.21
SNED1Q8TER0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
SNED1Q8TER0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SNED1Q8TER0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SNED1Q8TER0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNED1Q8TER0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNED1Q8TER0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SNED1Q8TER0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SNED1Q8TER0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.59■■□□□ 1.21
SNED1Q8TER0 PGAM5P1-201ENST00000518923 814 ntBASIC22.59■■□□□ 1.21
SNED1Q8TER0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SNED1Q8TER0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.59■■□□□ 1.21
SNED1Q8TER0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNED1Q8TER0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNED1Q8TER0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNED1Q8TER0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SNED1Q8TER0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNED1Q8TER0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SNED1Q8TER0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNED1Q8TER0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNED1Q8TER0 HNRNPDP1-201ENST00000439535 754 ntBASIC22.58■■□□□ 1.21
SNED1Q8TER0 MINOS1P3-201ENST00000457048 203 ntBASIC22.58■■□□□ 1.21
SNED1Q8TER0 AF186996.4-201ENST00000467186 377 ntBASIC22.58■■□□□ 1.21
SNED1Q8TER0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNED1Q8TER0 AC096582.2-201ENST00000510860 516 ntBASIC22.58■■□□□ 1.21
SNED1Q8TER0 MIR5100-201ENST00000579544 119 ntBASIC22.58■■□□□ 1.21
SNED1Q8TER0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.58■■□□□ 1.21
SNED1Q8TER0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNED1Q8TER0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.58■■□□□ 1.21
SNED1Q8TER0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.58■■□□□ 1.2
SNED1Q8TER0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
SNED1Q8TER0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SNED1Q8TER0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.58■■□□□ 1.2
SNED1Q8TER0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms