Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 MIR574-201ENST00000385209 96 ntBASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 AC117500.6-201ENST00000624871 588 ntBASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CSB-PGBD3P0DP91 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 RPP21-221ENST00000428040 594 ntTSL 2 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 RNA5SP419-201ENST00000515908 135 ntBASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 SLC25A1P1-201ENST00000528351 927 ntBASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 AC009065.1-201ENST00000564055 1225 ntBASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSB-PGBD3P0DP91 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 TLE1-202ENST00000376484 666 ntTSL 3 BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 KRT18P13-201ENST00000400056 1290 ntBASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 AL591684.3-201ENST00000605187 298 ntBASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.61■■□□□ 1.53
CSB-PGBD3P0DP91 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 POM121L3P-201ENST00000419331 1163 ntBASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSB-PGBD3P0DP91 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 AL031284.1-201ENST00000419297 478 ntBASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSB-PGBD3P0DP91 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 KRT89P-201ENST00000620027 1478 ntBASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 EMD-201ENST00000369835 966 ntTSL 3 BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 BNIP3P18-201ENST00000593976 575 ntBASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CSB-PGBD3P0DP91 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms