Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.19□□□□□ -0.46
P03980 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.19□□□□□ -0.46
P03980 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.19□□□□□ -0.46
P03980 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.19□□□□□ -0.46
P03980 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P03980 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
P03980 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P03980 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.18□□□□□ -0.46
P03980 Gm13474-201ENSMUST00000122466 815 ntBASIC12.18□□□□□ -0.46
P03980 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.18□□□□□ -0.46
P03980 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.18□□□□□ -0.46
P03980 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
P03980 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.18□□□□□ -0.46
P03980 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
P03980 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
P03980 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P03980 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P03980 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.17□□□□□ -0.46
P03980 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.17□□□□□ -0.46
P03980 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.17□□□□□ -0.46
P03980 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.17□□□□□ -0.46
P03980 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
P03980 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
P03980 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
P03980 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.17□□□□□ -0.46
P03980 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.17□□□□□ -0.46
P03980 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P03980 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P03980 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P03980 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P03980 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P03980 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P03980 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P03980 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
P03980 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.16□□□□□ -0.46
P03980 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P03980 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P03980 Gm2274-201ENSMUST00000184539 609 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms