Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.66■■□□□ 1.06
SSC5DA1L4H1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 BX842568.4-201ENST00000421222 227 ntBASIC21.65■■□□□ 1.06
SSC5DA1L4H1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 HEIH-201ENST00000623091 1652 ntBASIC21.65■■□□□ 1.06
SSC5DA1L4H1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSC5DA1L4H1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SSC5DA1L4H1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.64■■□□□ 1.06
SSC5DA1L4H1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.64■■□□□ 1.06
SSC5DA1L4H1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SSC5DA1L4H1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SSC5DA1L4H1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 AC132008.2-207ENST00000454517 770 ntBASIC21.64■■□□□ 1.05
SSC5DA1L4H1 KRT18P41-201ENST00000518924 1277 ntBASIC21.64■■□□□ 1.05
SSC5DA1L4H1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SSC5DA1L4H1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 RCN1P2-201ENST00000398357 915 ntBASIC21.63■■□□□ 1.05
SSC5DA1L4H1 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 PGAM5P1-201ENST00000518923 814 ntBASIC21.63■■□□□ 1.05
SSC5DA1L4H1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SSC5DA1L4H1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.62■■□□□ 1.05
SSC5DA1L4H1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSC5DA1L4H1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 RPL13AP23-201ENST00000480739 586 ntBASIC21.61■■□□□ 1.05
SSC5DA1L4H1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSC5DA1L4H1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms