Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.62□□□□□ -0.55
Trav16d-dv11A0A075B617 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Il3ra-202ENSMUST00000223589 738 ntBASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav16d-dv11A0A075B617 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16d-dv11A0A075B617 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms