Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPA4Q9UI42 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.22■□□□□ 0.99
CPA4Q9UI42 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPA4Q9UI42 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPA4Q9UI42 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPA4Q9UI42 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPA4Q9UI42 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPA4Q9UI42 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPA4Q9UI42 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 AC139887.3-201ENST00000568585 713 ntBASIC21.22■□□□□ 0.99
CPA4Q9UI42 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPA4Q9UI42 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPA4Q9UI42 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CPA4Q9UI42 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPA4Q9UI42 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.21■□□□□ 0.99
CPA4Q9UI42 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPA4Q9UI42 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.21■□□□□ 0.99
CPA4Q9UI42 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.21■□□□□ 0.99
CPA4Q9UI42 AC114341.1-201ENST00000618070 349 ntBASIC21.21■□□□□ 0.99
CPA4Q9UI42 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CPA4Q9UI42 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPA4Q9UI42 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPA4Q9UI42 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPA4Q9UI42 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.21■□□□□ 0.99
CPA4Q9UI42 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.21■□□□□ 0.99
CPA4Q9UI42 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 KRT89P-201ENST00000620027 1478 ntBASIC21.2■□□□□ 0.98
CPA4Q9UI42 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.2■□□□□ 0.98
CPA4Q9UI42 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.2■□□□□ 0.98
CPA4Q9UI42 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.2■□□□□ 0.98
CPA4Q9UI42 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.2■□□□□ 0.98
CPA4Q9UI42 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.2■□□□□ 0.98
CPA4Q9UI42 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.2■□□□□ 0.98
CPA4Q9UI42 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CPA4Q9UI42 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CPA4Q9UI42 FAM215A-202ENST00000632077 792 ntBASIC21.2■□□□□ 0.98
CPA4Q9UI42 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CPA4Q9UI42 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.2■□□□□ 0.98
CPA4Q9UI42 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPA4Q9UI42 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.19■□□□□ 0.98
CPA4Q9UI42 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.19■□□□□ 0.98
CPA4Q9UI42 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPA4Q9UI42 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.19■□□□□ 0.98
CPA4Q9UI42 HNRNPDP1-201ENST00000439535 754 ntBASIC21.19■□□□□ 0.98
CPA4Q9UI42 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CPA4Q9UI42 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.19■□□□□ 0.98
CPA4Q9UI42 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPA4Q9UI42 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.19■□□□□ 0.98
CPA4Q9UI42 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.19■□□□□ 0.98
CPA4Q9UI42 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPA4Q9UI42 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPA4Q9UI42 ZNF259P1-201ENST00000407656 1365 ntBASIC21.19■□□□□ 0.98
CPA4Q9UI42 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPA4Q9UI42 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.19■□□□□ 0.98
CPA4Q9UI42 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPA4Q9UI42 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPA4Q9UI42 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPA4Q9UI42 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPA4Q9UI42 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.18■□□□□ 0.98
CPA4Q9UI42 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.18■□□□□ 0.98
CPA4Q9UI42 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.18■□□□□ 0.98
CPA4Q9UI42 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.18■□□□□ 0.98
CPA4Q9UI42 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CPA4Q9UI42 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.18■□□□□ 0.98
CPA4Q9UI42 AC005104.2-201ENST00000427818 678 ntBASIC21.18■□□□□ 0.98
CPA4Q9UI42 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.18■□□□□ 0.98
CPA4Q9UI42 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.18■□□□□ 0.98
CPA4Q9UI42 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CPA4Q9UI42 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.18■□□□□ 0.98
CPA4Q9UI42 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPA4Q9UI42 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPA4Q9UI42 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPA4Q9UI42 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms