Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC008556.1-201ENST00000610908 2040 ntBASIC21.18■□□□□ 0.98
SYNGAP1Q96PV0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 AL845331.1-201ENST00000424978 1190 ntBASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 FDX1P1-201ENST00000449115 551 ntBASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 KRT17P6-201ENST00000453795 1220 ntBASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 UNC93B7-201ENST00000509439 705 ntBASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 RNF126P1-202ENST00000569893 925 ntBASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNGAP1Q96PV0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNGAP1Q96PV0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNGAP1Q96PV0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SYNGAP1Q96PV0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SYNGAP1Q96PV0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.14■□□□□ 0.98
SYNGAP1Q96PV0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.14■□□□□ 0.98
SYNGAP1Q96PV0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 MIR564-202ENST00000385049 94 ntBASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 TSPY19P-201ENST00000418461 509 ntBASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 TSPY18P-201ENST00000441642 509 ntBASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 FEM1AP3-201ENST00000403722 1741 ntBASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 IRX1P1-201ENST00000438849 1838 ntBASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 AC141586.3-201ENST00000562166 1838 ntBASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SYNGAP1Q96PV0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 IFNL4P1-201ENST00000607083 540 ntBASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.13■□□□□ 0.97
SYNGAP1Q96PV0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms