Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Gm7153-201ENSMUST00000117092 455 ntBASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Gm9172-201ENSMUST00000212092 954 ntBASIC16.05■□□□□ 0.16
Sfr1Q8BP27 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sfr1Q8BP27 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Gm34391-201ENSMUST00000203706 907 ntBASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sfr1Q8BP27 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Gm24589-201ENSMUST00000116692 94 ntBASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sfr1Q8BP27 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Gm43347-201ENSMUST00000200226 580 ntBASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Sfr1Q8BP27 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sfr1Q8BP27 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sfr1Q8BP27 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sfr1Q8BP27 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.02■□□□□ 0.15
Sfr1Q8BP27 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sfr1Q8BP27 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sfr1Q8BP27 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sfr1Q8BP27 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sfr1Q8BP27 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sfr1Q8BP27 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sfr1Q8BP27 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sfr1Q8BP27 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sfr1Q8BP27 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sfr1Q8BP27 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms