Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1EQ15878 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1EQ15878 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1EQ15878 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1EQ15878 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1EQ15878 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.12■□□□□ 0.49
CACNA1EQ15878 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.12■□□□□ 0.49
CACNA1EQ15878 FAM197Y8-203ENST00000450145 560 ntBASIC18.12■□□□□ 0.49
CACNA1EQ15878 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CACNA1EQ15878 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 IRX1P1-201ENST00000438849 1838 ntBASIC18.12■□□□□ 0.49
CACNA1EQ15878 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1EQ15878 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1EQ15878 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 MTMR9LP-203ENST00000426597 1545 ntBASIC18.12■□□□□ 0.49
CACNA1EQ15878 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1EQ15878 AC148477.8-201ENST00000624298 468 ntBASIC18.12■□□□□ 0.49
CACNA1EQ15878 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1EQ15878 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.12■□□□□ 0.49
CACNA1EQ15878 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.12■□□□□ 0.49
CACNA1EQ15878 KRT8P50-201ENST00000562022 1438 ntBASIC18.12■□□□□ 0.49
CACNA1EQ15878 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1EQ15878 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 RN7SL606P-201ENST00000472779 293 ntBASIC18.11■□□□□ 0.49
CACNA1EQ15878 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1EQ15878 AC009065.1-201ENST00000564055 1225 ntBASIC18.11■□□□□ 0.49
CACNA1EQ15878 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1EQ15878 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1EQ15878 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1EQ15878 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1EQ15878 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1EQ15878 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1EQ15878 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1EQ15878 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CACNA1EQ15878 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1EQ15878 BX842568.4-201ENST00000421222 227 ntBASIC18.1■□□□□ 0.49
CACNA1EQ15878 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1EQ15878 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1EQ15878 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1EQ15878 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1EQ15878 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 Z98044.1-201ENST00000632503 1764 ntBASIC18.1■□□□□ 0.49
CACNA1EQ15878 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1EQ15878 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1EQ15878 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1EQ15878 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1EQ15878 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 AC011840.4-201ENST00000578471 627 ntBASIC18.1■□□□□ 0.49
CACNA1EQ15878 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.1■□□□□ 0.49
CACNA1EQ15878 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1EQ15878 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CACNA1EQ15878 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CACNA1EQ15878 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.09■□□□□ 0.49
CACNA1EQ15878 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CACNA1EQ15878 AC145285.3-201ENST00000564603 959 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms