Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CLTCL1P53675 NUS1P2-201ENST00000417358 873 ntBASIC26.68■■□□□ 1.86
CLTCL1P53675 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC26.68■■□□□ 1.86
CLTCL1P53675 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CLTCL1P53675 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
CLTCL1P53675 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CLTCL1P53675 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLTCL1P53675 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLTCL1P53675 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLTCL1P53675 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLTCL1P53675 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLTCL1P53675 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CLTCL1P53675 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
CLTCL1P53675 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
CLTCL1P53675 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLTCL1P53675 IGHV3OR16-7-201ENST00000604106 360 ntBASIC26.67■■□□□ 1.86
CLTCL1P53675 AL353801.3-201ENST00000609898 542 ntBASIC26.67■■□□□ 1.86
CLTCL1P53675 AL121772.3-201ENST00000610840 674 ntBASIC26.67■■□□□ 1.86
CLTCL1P53675 AC124864.1-201ENST00000623408 392 ntBASIC26.67■■□□□ 1.86
CLTCL1P53675 AC083906.6-201ENST00000641366 219 ntBASIC26.67■■□□□ 1.86
CLTCL1P53675 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLTCL1P53675 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLTCL1P53675 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLTCL1P53675 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC26.66■■□□□ 1.86
CLTCL1P53675 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
CLTCL1P53675 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
CLTCL1P53675 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
CLTCL1P53675 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CLTCL1P53675 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CLTCL1P53675 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CLTCL1P53675 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLTCL1P53675 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLTCL1P53675 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CLTCL1P53675 AL160237.2-201ENST00000556165 472 ntBASIC26.65■■□□□ 1.86
CLTCL1P53675 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC26.65■■□□□ 1.86
CLTCL1P53675 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLTCL1P53675 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC26.65■■□□□ 1.86
CLTCL1P53675 REXO1L6P-202ENST00000619970 1078 ntBASIC26.65■■□□□ 1.86
CLTCL1P53675 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLTCL1P53675 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC26.65■■□□□ 1.86
CLTCL1P53675 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC26.65■■□□□ 1.86
CLTCL1P53675 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CLTCL1P53675 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLTCL1P53675 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CLTCL1P53675 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLTCL1P53675 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CLTCL1P53675 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
CLTCL1P53675 AL671883.3-201ENST00000603274 991 ntBASIC26.65■■□□□ 1.86
CLTCL1P53675 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLTCL1P53675 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CLTCL1P53675 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC26.64■■□□□ 1.86
CLTCL1P53675 NARF-204ENST00000390006 1766 ntTSL 2 BASIC26.64■■□□□ 1.86
CLTCL1P53675 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC26.64■■□□□ 1.86
CLTCL1P53675 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC26.64■■□□□ 1.85
CLTCL1P53675 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CLTCL1P53675 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC26.64■■□□□ 1.85
CLTCL1P53675 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC26.63■■□□□ 1.85
CLTCL1P53675 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLTCL1P53675 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC26.63■■□□□ 1.85
CLTCL1P53675 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLTCL1P53675 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLTCL1P53675 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLTCL1P53675 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
CLTCL1P53675 SAPCD2P3-201ENST00000455031 850 ntBASIC26.63■■□□□ 1.85
CLTCL1P53675 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CLTCL1P53675 FICD-205ENST00000552758 603 ntTSL 2 BASIC26.63■■□□□ 1.85
CLTCL1P53675 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC26.63■■□□□ 1.85
CLTCL1P53675 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLTCL1P53675 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.63■■□□□ 1.85
CLTCL1P53675 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC26.63■■□□□ 1.85
CLTCL1P53675 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLTCL1P53675 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLTCL1P53675 AC007952.6-201ENST00000573168 2673 ntBASIC26.62■■□□□ 1.85
CLTCL1P53675 AC003957.1-201ENST00000625108 2673 ntBASIC26.62■■□□□ 1.85
CLTCL1P53675 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CLTCL1P53675 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLTCL1P53675 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLTCL1P53675 MIR149-201ENST00000384879 89 ntBASIC26.62■■□□□ 1.85
CLTCL1P53675 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC26.62■■□□□ 1.85
CLTCL1P53675 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC26.62■■□□□ 1.85
CLTCL1P53675 AC091304.2-201ENST00000564639 760 ntBASIC26.62■■□□□ 1.85
CLTCL1P53675 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLTCL1P53675 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC26.62■■□□□ 1.85
CLTCL1P53675 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLTCL1P53675 AL024508.2-201ENST00000607749 1894 ntBASIC26.62■■□□□ 1.85
CLTCL1P53675 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLTCL1P53675 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CLTCL1P53675 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC26.62■■□□□ 1.85
CLTCL1P53675 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms