Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cbx3P23198 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Cbx3P23198 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
Cbx3P23198 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx3P23198 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.43□□□□□ -0.1
Cbx3P23198 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.43□□□□□ -0.1
Cbx3P23198 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx3P23198 Zfp783-201ENSMUST00000095946 670 ntBASIC14.43□□□□□ -0.1
Cbx3P23198 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cbx3P23198 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx3P23198 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx3P23198 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx3P23198 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx3P23198 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx3P23198 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.43□□□□□ -0.1
Cbx3P23198 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx3P23198 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.43□□□□□ -0.1
Cbx3P23198 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Cbx3P23198 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx3P23198 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cbx3P23198 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Cbx3P23198 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cbx3P23198 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cbx3P23198 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.42□□□□□ -0.1
Cbx3P23198 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cbx3P23198 Gm12933-201ENSMUST00000120203 872 ntBASIC14.42□□□□□ -0.1
Cbx3P23198 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cbx3P23198 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.42□□□□□ -0.1
Cbx3P23198 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.42□□□□□ -0.1
Cbx3P23198 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cbx3P23198 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.42□□□□□ -0.1
Cbx3P23198 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.42□□□□□ -0.1
Cbx3P23198 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx3P23198 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cbx3P23198 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.41□□□□□ -0.1
Cbx3P23198 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Gm26524-201ENSMUST00000192339 390 ntBASIC14.41□□□□□ -0.1
Cbx3P23198 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.41□□□□□ -0.1
Cbx3P23198 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cbx3P23198 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cbx3P23198 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Cbx3P23198 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cbx3P23198 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.41□□□□□ -0.1
Cbx3P23198 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cbx3P23198 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx3P23198 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.4□□□□□ -0.1
Cbx3P23198 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.4□□□□□ -0.1
Cbx3P23198 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.4□□□□□ -0.1
Cbx3P23198 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cbx3P23198 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx3P23198 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.4□□□□□ -0.1
Cbx3P23198 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cbx3P23198 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms