Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.64□□□□□ -0.07
Cdh3P10287 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.64□□□□□ -0.07
Cdh3P10287 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cdh3P10287 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cdh3P10287 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cdh3P10287 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.64□□□□□ -0.07
Cdh3P10287 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdh3P10287 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cdh3P10287 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cdh3P10287 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.63□□□□□ -0.07
Cdh3P10287 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Gm6659-201ENSMUST00000174752 547 ntBASIC14.63□□□□□ -0.07
Cdh3P10287 Gm23634-201ENSMUST00000175071 91 ntBASIC14.63□□□□□ -0.07
Cdh3P10287 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.63□□□□□ -0.07
Cdh3P10287 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Cdh3P10287 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdh3P10287 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdh3P10287 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh3P10287 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cdh3P10287 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Cdh3P10287 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdh3P10287 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Cdh3P10287 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.62□□□□□ -0.07
Cdh3P10287 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cdh3P10287 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cdh3P10287 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cdh3P10287 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cdh3P10287 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh3P10287 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Cdh3P10287 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cdh3P10287 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cdh3P10287 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cdh3P10287 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cdh3P10287 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Gm11355-201ENSMUST00000121120 306 ntBASIC14.61□□□□□ -0.07
Cdh3P10287 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.61□□□□□ -0.07
Cdh3P10287 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.61□□□□□ -0.07
Cdh3P10287 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms