Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
COL5A2P05997 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL5A2P05997 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL5A2P05997 AL137060.1-201ENST00000618151 2648 ntBASIC24.51■■□□□ 1.51
COL5A2P05997 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL5A2P05997 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL5A2P05997 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC24.51■■□□□ 1.51
COL5A2P05997 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC24.51■■□□□ 1.51
COL5A2P05997 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC24.51■■□□□ 1.51
COL5A2P05997 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC24.51■■□□□ 1.51
COL5A2P05997 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC24.51■■□□□ 1.51
COL5A2P05997 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC24.51■■□□□ 1.51
COL5A2P05997 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL5A2P05997 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL5A2P05997 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
COL5A2P05997 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL5A2P05997 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL5A2P05997 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL5A2P05997 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC24.5■■□□□ 1.51
COL5A2P05997 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL5A2P05997 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.5■■□□□ 1.51
COL5A2P05997 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
COL5A2P05997 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC24.5■■□□□ 1.51
COL5A2P05997 IGHV3-22-201ENST00000520721 359 ntBASIC24.5■■□□□ 1.51
COL5A2P05997 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL5A2P05997 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL5A2P05997 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
COL5A2P05997 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL5A2P05997 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
COL5A2P05997 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL5A2P05997 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.49■■□□□ 1.51
COL5A2P05997 RCN1P2-201ENST00000398357 915 ntBASIC24.49■■□□□ 1.51
COL5A2P05997 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL5A2P05997 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC24.49■■□□□ 1.51
COL5A2P05997 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
COL5A2P05997 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
COL5A2P05997 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL5A2P05997 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL5A2P05997 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL5A2P05997 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL5A2P05997 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
COL5A2P05997 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL5A2P05997 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL5A2P05997 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
COL5A2P05997 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL5A2P05997 CSF3-203ENST00000394148 622 ntTSL 3 BASIC24.48■■□□□ 1.51
COL5A2P05997 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL5A2P05997 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL5A2P05997 AC113404.2-201ENST00000507884 177 ntBASIC24.48■■□□□ 1.51
COL5A2P05997 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL5A2P05997 GZMM-202ENST00000592501 941 ntTSL 3 BASIC24.48■■□□□ 1.51
COL5A2P05997 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC24.48■■□□□ 1.51
COL5A2P05997 AC116407.3-201ENST00000623905 1129 ntBASIC24.48■■□□□ 1.51
COL5A2P05997 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL5A2P05997 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
COL5A2P05997 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL5A2P05997 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.48■■□□□ 1.51
COL5A2P05997 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.47■■□□□ 1.51
COL5A2P05997 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.47■■□□□ 1.51
COL5A2P05997 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL5A2P05997 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC24.47■■□□□ 1.51
COL5A2P05997 KRT18P41-201ENST00000518924 1277 ntBASIC24.47■■□□□ 1.51
COL5A2P05997 ANKRD20A8P-203ENST00000641373 517 ntBASIC24.47■■□□□ 1.51
COL5A2P05997 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL5A2P05997 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL5A2P05997 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL5A2P05997 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL5A2P05997 FP475955.4-201ENST00000623131 1990 ntBASIC24.47■■□□□ 1.51
COL5A2P05997 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL5A2P05997 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL5A2P05997 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL5A2P05997 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL5A2P05997 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
COL5A2P05997 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL5A2P05997 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.46■■□□□ 1.51
COL5A2P05997 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL5A2P05997 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
COL5A2P05997 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL5A2P05997 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC24.46■■□□□ 1.51
COL5A2P05997 MTMR9LP-203ENST00000426597 1545 ntBASIC24.46■■□□□ 1.51
COL5A2P05997 ZNF259P1-201ENST00000407656 1365 ntBASIC24.46■■□□□ 1.51
COL5A2P05997 MED16-201ENST00000269814 1199 ntTSL 5 BASIC24.46■■□□□ 1.51
COL5A2P05997 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL5A2P05997 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL5A2P05997 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC24.46■■□□□ 1.51
COL5A2P05997 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
COL5A2P05997 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC24.46■■□□□ 1.51
COL5A2P05997 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL5A2P05997 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
COL5A2P05997 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.46■■□□□ 1.51
COL5A2P05997 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL5A2P05997 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
COL5A2P05997 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL5A2P05997 AC112777.1-201ENST00000540175 1423 ntBASIC24.46■■□□□ 1.51
COL5A2P05997 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC24.46■■□□□ 1.51
COL5A2P05997 PAN3-AS1-201ENST00000563843 1351 ntBASIC24.46■■□□□ 1.51
COL5A2P05997 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
COL5A2P05997 AC005104.2-201ENST00000427818 678 ntBASIC24.45■■□□□ 1.51
COL5A2P05997 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC24.45■■□□□ 1.51
COL5A2P05997 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC24.45■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms