Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
P01852 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
P01852 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.43□□□□□ -0.1
P01852 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Gm25406-201ENSMUST00000157599 105 ntBASIC14.43□□□□□ -0.1
P01852 Gm25745-201ENSMUST00000174945 133 ntBASIC14.43□□□□□ -0.1
P01852 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.43□□□□□ -0.1
P01852 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.43□□□□□ -0.1
P01852 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
P01852 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
P01852 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.43□□□□□ -0.1
P01852 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P01852 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.42□□□□□ -0.1
P01852 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
P01852 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.42□□□□□ -0.1
P01852 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.42□□□□□ -0.1
P01852 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.42□□□□□ -0.1
P01852 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.42□□□□□ -0.1
P01852 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P01852 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
P01852 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
P01852 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.41□□□□□ -0.1
P01852 Gm9172-201ENSMUST00000212092 954 ntBASIC14.41□□□□□ -0.1
P01852 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
P01852 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
P01852 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P01852 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.4□□□□□ -0.1
P01852 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
P01852 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
P01852 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.4□□□□□ -0.1
P01852 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P01852 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
P01852 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms