Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Syn1O88935 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.2■□□□□ 0.18
Syn1O88935 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.2■□□□□ 0.18
Syn1O88935 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.2■□□□□ 0.18
Syn1O88935 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Syn1O88935 Gm9682-201ENSMUST00000197505 556 ntBASIC16.2■□□□□ 0.18
Syn1O88935 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.2■□□□□ 0.18
Syn1O88935 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.2■□□□□ 0.18
Syn1O88935 Gm2423-201ENSMUST00000074863 733 ntBASIC16.2■□□□□ 0.18
Syn1O88935 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Syn1O88935 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Haglr-201ENSMUST00000100000 2085 ntBASIC16.2■□□□□ 0.18
Syn1O88935 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Syn1O88935 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Syn1O88935 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.2■□□□□ 0.18
Syn1O88935 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Syn1O88935 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syn1O88935 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.19■□□□□ 0.18
Syn1O88935 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Syn1O88935 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.19■□□□□ 0.18
Syn1O88935 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Syn1O88935 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Syn1O88935 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Syn1O88935 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.19■□□□□ 0.18
Syn1O88935 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Syn1O88935 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Syn1O88935 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.18■□□□□ 0.18
Syn1O88935 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.18■□□□□ 0.18
Syn1O88935 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.18■□□□□ 0.18
Syn1O88935 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.18■□□□□ 0.18
Syn1O88935 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.18■□□□□ 0.18
Syn1O88935 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Syn1O88935 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.18■□□□□ 0.18
Syn1O88935 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Syn1O88935 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Syn1O88935 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Syn1O88935 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Syn1O88935 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Syn1O88935 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Syn1O88935 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.17■□□□□ 0.18
Syn1O88935 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.17■□□□□ 0.18
Syn1O88935 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.17■□□□□ 0.18
Syn1O88935 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.17■□□□□ 0.18
Syn1O88935 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Syn1O88935 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Syn1O88935 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Syn1O88935 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Syn1O88935 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms