Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CCDC196A0A1B0GTZ2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CCDC196A0A1B0GTZ2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 AL499627.1-201ENST00000569373 2188 ntBASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC196A0A1B0GTZ2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC196A0A1B0GTZ2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC196A0A1B0GTZ2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC196A0A1B0GTZ2 AC073592.3-201ENST00000625118 1834 ntBASIC21.64■■□□□ 1.06
CCDC196A0A1B0GTZ2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC196A0A1B0GTZ2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC196A0A1B0GTZ2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC196A0A1B0GTZ2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 SLC25A3P1-201ENST00000443844 931 ntBASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 MYLKP1-201ENST00000509077 1580 ntBASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC196A0A1B0GTZ2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CCDC196A0A1B0GTZ2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC196A0A1B0GTZ2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCDC196A0A1B0GTZ2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC196A0A1B0GTZ2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC196A0A1B0GTZ2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms