Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mbd3l1Q9D9H3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Mbd3l1Q9D9H3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mbd3l1Q9D9H3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms