Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Mir770-201ENSMUST00000103252 94 ntBASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf111Q99ML9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Gm5587-201ENSMUST00000206270 674 ntBASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf111Q99ML9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf111Q99ML9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf111Q99ML9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms