Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 GPX1P1-201ENST00000388829 606 ntBASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 AC073210.2-201ENST00000430369 194 ntBASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 KRT18P14-201ENST00000534205 1250 ntBASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 UBALD1-205ENST00000590891 2641 ntBASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PDLIM2Q96JY6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PDLIM2Q96JY6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDLIM2Q96JY6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PDLIM2Q96JY6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDLIM2Q96JY6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 KRT18P16-201ENST00000510337 1294 ntBASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 CICP6-201ENST00000457191 2729 ntBASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.64■□□□□ 0.89
PDLIM2Q96JY6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 AP006587.1-201ENST00000534129 1502 ntBASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 PCDHB19P-201ENST00000570871 2371 ntBASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDLIM2Q96JY6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 BID-214ENST00000617586 542 ntTSL 5 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.62■□□□□ 0.89
PDLIM2Q96JY6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms