Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 NFYC-AS1-201ENST00000606277 1687 ntBASIC23■■□□□ 1.27
RTL9Q8NET4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23■■□□□ 1.27
RTL9Q8NET4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23■■□□□ 1.27
RTL9Q8NET4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RTL9Q8NET4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTL9Q8NET4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTL9Q8NET4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTL9Q8NET4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTL9Q8NET4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RTL9Q8NET4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23■■□□□ 1.27
RTL9Q8NET4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23■■□□□ 1.27
RTL9Q8NET4 DRAXINP1-201ENST00000437611 948 ntBASIC23■■□□□ 1.27
RTL9Q8NET4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23■■□□□ 1.27
RTL9Q8NET4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTL9Q8NET4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTL9Q8NET4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTL9Q8NET4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTL9Q8NET4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTL9Q8NET4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTL9Q8NET4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTL9Q8NET4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTL9Q8NET4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 AL845331.1-201ENST00000424978 1190 ntBASIC22.99■■□□□ 1.27
RTL9Q8NET4 AP000347.1-202ENST00000435868 847 ntBASIC22.99■■□□□ 1.27
RTL9Q8NET4 TPSP2-201ENST00000561760 610 ntBASIC22.99■■□□□ 1.27
RTL9Q8NET4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTL9Q8NET4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.99■■□□□ 1.27
RTL9Q8NET4 AL357033.4-201ENST00000617703 1807 ntBASIC22.98■■□□□ 1.27
RTL9Q8NET4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.98■■□□□ 1.27
RTL9Q8NET4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RTL9Q8NET4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.98■■□□□ 1.27
RTL9Q8NET4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
RTL9Q8NET4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.98■■□□□ 1.27
RTL9Q8NET4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.98■■□□□ 1.27
RTL9Q8NET4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC22.98■■□□□ 1.27
RTL9Q8NET4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.98■■□□□ 1.27
RTL9Q8NET4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 AC009065.1-201ENST00000564055 1225 ntBASIC22.98■■□□□ 1.27
RTL9Q8NET4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
RTL9Q8NET4 AC083906.6-201ENST00000641366 219 ntBASIC22.98■■□□□ 1.27
RTL9Q8NET4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTL9Q8NET4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.97■■□□□ 1.27
RTL9Q8NET4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RTL9Q8NET4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.97■■□□□ 1.27
RTL9Q8NET4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTL9Q8NET4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.97■■□□□ 1.27
RTL9Q8NET4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTL9Q8NET4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.97■■□□□ 1.27
RTL9Q8NET4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.97■■□□□ 1.27
RTL9Q8NET4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTL9Q8NET4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.97■■□□□ 1.27
RTL9Q8NET4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.97■■□□□ 1.27
RTL9Q8NET4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTL9Q8NET4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTL9Q8NET4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RTL9Q8NET4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RTL9Q8NET4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTL9Q8NET4 KRT89P-201ENST00000620027 1478 ntBASIC22.96■■□□□ 1.27
RTL9Q8NET4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTL9Q8NET4 Z83836.1-201ENST00000624605 1642 ntBASIC22.96■■□□□ 1.27
RTL9Q8NET4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTL9Q8NET4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTL9Q8NET4 AP000593.1-201ENST00000393668 712 ntBASIC22.96■■□□□ 1.27
RTL9Q8NET4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTL9Q8NET4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 AC111152.3-201ENST00000569699 673 ntBASIC22.96■■□□□ 1.27
RTL9Q8NET4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTL9Q8NET4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
RTL9Q8NET4 AFG3L1P-217ENST00000557444 2447 ntBASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms