Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trpa1Q8BLA8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trpa1Q8BLA8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trpa1Q8BLA8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trpa1Q8BLA8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trpa1Q8BLA8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.64■□□□□ 0.25
Trpa1Q8BLA8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trpa1Q8BLA8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Gm27867-201ENSMUST00000184778 125 ntBASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.62■□□□□ 0.25
Trpa1Q8BLA8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trpa1Q8BLA8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trpa1Q8BLA8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trpa1Q8BLA8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trpa1Q8BLA8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trpa1Q8BLA8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trpa1Q8BLA8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trpa1Q8BLA8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trpa1Q8BLA8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trpa1Q8BLA8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trpa1Q8BLA8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms