Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 AL845331.1-201ENST00000424978 1190 ntBASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 AL390719.2-201ENST00000606993 987 ntBASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 KRT8P7-201ENST00000533003 1432 ntBASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHROOM1Q2M3G4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 HEIH-201ENST00000623091 1652 ntBASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 PVRIG2P-201ENST00000435460 978 ntBASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 LINC00265-3P-201ENST00000447588 903 ntBASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 KRT8P50-201ENST00000562022 1438 ntBASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.77■■□□□ 1.08
SHROOM1Q2M3G4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SHROOM1Q2M3G4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.77■■□□□ 1.07
SHROOM1Q2M3G4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
SHROOM1Q2M3G4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 TOB2P1-201ENST00000469761 992 ntBASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 AP000867.3-201ENST00000524675 377 ntBASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 AL691432.3-201ENST00000621860 400 ntBASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHROOM1Q2M3G4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 AP003733.1-201ENST00000491725 852 ntBASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms