Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLDN6P56747 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN6P56747 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN6P56747 AC233702.3-201ENST00000578656 1387 ntBASIC17.91■□□□□ 0.46
CLDN6P56747 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLDN6P56747 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN6P56747 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN6P56747 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.91■□□□□ 0.46
CLDN6P56747 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN6P56747 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN6P56747 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN6P56747 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN6P56747 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN6P56747 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN6P56747 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLDN6P56747 AL590627.1-203ENST00000421194 1026 ntBASIC17.91■□□□□ 0.46
CLDN6P56747 AP003733.1-201ENST00000491725 852 ntBASIC17.91■□□□□ 0.46
CLDN6P56747 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN6P56747 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CLDN6P56747 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.91■□□□□ 0.46
CLDN6P56747 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN6P56747 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.91■□□□□ 0.46
CLDN6P56747 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.91■□□□□ 0.46
CLDN6P56747 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLDN6P56747 AL390719.2-201ENST00000606993 987 ntBASIC17.91■□□□□ 0.46
CLDN6P56747 AC010240.3-201ENST00000607688 395 ntBASIC17.91■□□□□ 0.46
CLDN6P56747 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN6P56747 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN6P56747 RCC2P3-201ENST00000418112 1537 ntBASIC17.91■□□□□ 0.46
CLDN6P56747 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN6P56747 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CLDN6P56747 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN6P56747 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN6P56747 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN6P56747 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLDN6P56747 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN6P56747 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.91■□□□□ 0.46
CLDN6P56747 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLDN6P56747 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLDN6P56747 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 KRT8P3-201ENST00000519669 1449 ntBASIC17.9■□□□□ 0.46
CLDN6P56747 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 TCF3P1-201ENST00000423021 1937 ntBASIC17.9■□□□□ 0.46
CLDN6P56747 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CLDN6P56747 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN6P56747 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLDN6P56747 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN6P56747 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CLDN6P56747 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 AC091607.1-201ENST00000490318 1060 ntBASIC17.9■□□□□ 0.46
CLDN6P56747 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN6P56747 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN6P56747 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN6P56747 TP73-AS1-207ENST00000624167 988 ntBASIC17.9■□□□□ 0.46
CLDN6P56747 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 AF228730.7-201ENST00000641842 219 ntBASIC17.9■□□□□ 0.46
CLDN6P56747 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLDN6P56747 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN6P56747 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN6P56747 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN6P56747 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN6P56747 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN6P56747 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms