Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Slc6a1P31648 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Slc6a1P31648 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Slc6a1P31648 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Slc6a1P31648 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.65□□□□□ -0.22
Slc6a1P31648 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Slc6a1P31648 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.65□□□□□ -0.22
Slc6a1P31648 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a1P31648 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Slc6a1P31648 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc6a1P31648 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc6a1P31648 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc6a1P31648 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc6a1P31648 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Gm27000-201ENSMUST00000182943 842 ntBASIC13.64□□□□□ -0.23
Slc6a1P31648 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc6a1P31648 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc6a1P31648 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Slc6a1P31648 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc6a1P31648 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Slc6a1P31648 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Slc6a1P31648 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Slc6a1P31648 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.63□□□□□ -0.23
Slc6a1P31648 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.63□□□□□ -0.23
Slc6a1P31648 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Slc6a1P31648 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slc6a1P31648 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slc6a1P31648 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.63□□□□□ -0.23
Slc6a1P31648 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc6a1P31648 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Slc6a1P31648 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Slc6a1P31648 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.62□□□□□ -0.23
Slc6a1P31648 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a1P31648 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a1P31648 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.62□□□□□ -0.23
Slc6a1P31648 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a1P31648 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.62□□□□□ -0.23
Slc6a1P31648 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.62□□□□□ -0.23
Slc6a1P31648 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.62□□□□□ -0.23
Slc6a1P31648 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Slc6a1P31648 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a1P31648 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a1P31648 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a1P31648 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.61□□□□□ -0.23
Slc6a1P31648 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a1P31648 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms