Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSF1P09603 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CSF1P09603 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.16■□□□□ 0.18
CSF1P09603 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CSF1P09603 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.16■□□□□ 0.18
CSF1P09603 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.16■□□□□ 0.18
CSF1P09603 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CSF1P09603 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.16■□□□□ 0.18
CSF1P09603 AC126763.1-201ENST00000552015 2118 ntBASIC16.16■□□□□ 0.18
CSF1P09603 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CSF1P09603 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.16■□□□□ 0.18
CSF1P09603 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CSF1P09603 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.16■□□□□ 0.18
CSF1P09603 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CSF1P09603 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSF1P09603 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CSF1P09603 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.15■□□□□ 0.18
CSF1P09603 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.15■□□□□ 0.18
CSF1P09603 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CSF1P09603 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.15■□□□□ 0.18
CSF1P09603 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CSF1P09603 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.15■□□□□ 0.18
CSF1P09603 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.15■□□□□ 0.18
CSF1P09603 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CSF1P09603 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CSF1P09603 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.15■□□□□ 0.18
CSF1P09603 CYP2T3P-201ENST00000601990 817 ntBASIC16.15■□□□□ 0.18
CSF1P09603 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CSF1P09603 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSF1P09603 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CSF1P09603 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CSF1P09603 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CSF1P09603 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CSF1P09603 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSF1P09603 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSF1P09603 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSF1P09603 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSF1P09603 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.14■□□□□ 0.17
CSF1P09603 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSF1P09603 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CSF1P09603 AL596275.1-201ENST00000423464 877 ntBASIC16.14■□□□□ 0.17
CSF1P09603 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CSF1P09603 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.14■□□□□ 0.17
CSF1P09603 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.14■□□□□ 0.17
CSF1P09603 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.14■□□□□ 0.17
CSF1P09603 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.14■□□□□ 0.17
CSF1P09603 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.14■□□□□ 0.17
CSF1P09603 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.14■□□□□ 0.17
CSF1P09603 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSF1P09603 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.14■□□□□ 0.17
CSF1P09603 AC073648.6-201ENST00000641589 218 ntBASIC16.14■□□□□ 0.17
CSF1P09603 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.14■□□□□ 0.17
CSF1P09603 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CSF1P09603 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.14■□□□□ 0.17
CSF1P09603 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.14■□□□□ 0.17
CSF1P09603 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CSF1P09603 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSF1P09603 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CSF1P09603 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSF1P09603 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CSF1P09603 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSF1P09603 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSF1P09603 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CSF1P09603 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSF1P09603 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSF1P09603 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSF1P09603 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms