Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.73■□□□□ 0.75
RB1P06400 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.73■□□□□ 0.75
RB1P06400 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RB1P06400 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RB1P06400 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.73■□□□□ 0.75
RB1P06400 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.73■□□□□ 0.75
RB1P06400 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.73■□□□□ 0.75
RB1P06400 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.73■□□□□ 0.75
RB1P06400 AF186996.4-201ENST00000467186 377 ntBASIC19.73■□□□□ 0.75
RB1P06400 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.73■□□□□ 0.75
RB1P06400 AC093909.1-201ENST00000504731 1122 ntBASIC19.73■□□□□ 0.75
RB1P06400 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RB1P06400 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RB1P06400 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.73■□□□□ 0.75
RB1P06400 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 FEM1AP3-201ENST00000403722 1741 ntBASIC19.73■□□□□ 0.75
RB1P06400 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RB1P06400 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RB1P06400 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.72■□□□□ 0.75
RB1P06400 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RB1P06400 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 AC091607.1-201ENST00000490318 1060 ntBASIC19.72■□□□□ 0.75
RB1P06400 RNPS1P1-201ENST00000507437 918 ntBASIC19.72■□□□□ 0.75
RB1P06400 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.72■□□□□ 0.75
RB1P06400 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.72■□□□□ 0.75
RB1P06400 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.72■□□□□ 0.75
RB1P06400 MIR5100-201ENST00000579544 119 ntBASIC19.72■□□□□ 0.75
RB1P06400 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RB1P06400 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RB1P06400 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.71■□□□□ 0.75
RB1P06400 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.71■□□□□ 0.75
RB1P06400 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.71■□□□□ 0.75
RB1P06400 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RB1P06400 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.71■□□□□ 0.75
RB1P06400 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.71■□□□□ 0.75
RB1P06400 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.71■□□□□ 0.75
RB1P06400 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RB1P06400 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RB1P06400 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.71■□□□□ 0.75
RB1P06400 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RB1P06400 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RB1P06400 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RB1P06400 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RB1P06400 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RB1P06400 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RB1P06400 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.7■□□□□ 0.74
RB1P06400 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RB1P06400 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.7■□□□□ 0.74
RB1P06400 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.7■□□□□ 0.74
RB1P06400 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.7■□□□□ 0.74
RB1P06400 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.7■□□□□ 0.74
RB1P06400 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RB1P06400 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RB1P06400 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.7■□□□□ 0.74
RB1P06400 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms