Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-1A0A075B606 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-1A0A075B606 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-1A0A075B606 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-1A0A075B606 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-1A0A075B606 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-1A0A075B606 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Gm15165-201ENSMUST00000118140 502 ntBASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav13d-1A0A075B606 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Gm27867-201ENSMUST00000184778 125 ntBASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13d-1A0A075B606 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13d-1A0A075B606 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms