Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPBQ9Y5S2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPBQ9Y5S2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
CDC42BPBQ9Y5S2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDC42BPBQ9Y5S2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC28.26■■■□□ 2.11
CDC42BPBQ9Y5S2 IGHV3-41-201ENST00000613121 348 ntBASIC28.26■■■□□ 2.11
CDC42BPBQ9Y5S2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC28.26■■■□□ 2.11
CDC42BPBQ9Y5S2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC28.25■■■□□ 2.11
CDC42BPBQ9Y5S2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 LINC01711-201ENST00000598340 967 ntBASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC28.24■■■□□ 2.11
CDC42BPBQ9Y5S2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 LINC01521-201ENST00000504184 1943 ntBASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 AC139530.3-201ENST00000620344 690 ntBASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPBQ9Y5S2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 CCS-201ENST00000310190 942 ntTSL 5 BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 AC096582.2-201ENST00000510860 516 ntBASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CDC42BPBQ9Y5S2 AC141586.3-201ENST00000562166 1838 ntBASIC28.21■■■□□ 2.11
CDC42BPBQ9Y5S2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC28.21■■■□□ 2.11
CDC42BPBQ9Y5S2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CDC42BPBQ9Y5S2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CDC42BPBQ9Y5S2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC28.21■■■□□ 2.11
CDC42BPBQ9Y5S2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CDC42BPBQ9Y5S2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CDC42BPBQ9Y5S2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
CDC42BPBQ9Y5S2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC28.21■■■□□ 2.11
CDC42BPBQ9Y5S2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC28.21■■■□□ 2.11
CDC42BPBQ9Y5S2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CDC42BPBQ9Y5S2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CDC42BPBQ9Y5S2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CDC42BPBQ9Y5S2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
CDC42BPBQ9Y5S2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CDC42BPBQ9Y5S2 MED22-202ENST00000371999 987 ntTSL 3 BASIC28.2■■■□□ 2.1
CDC42BPBQ9Y5S2 FAM197Y8-203ENST00000450145 560 ntBASIC28.2■■■□□ 2.1
CDC42BPBQ9Y5S2 AC113404.2-201ENST00000507884 177 ntBASIC28.2■■■□□ 2.1
CDC42BPBQ9Y5S2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC28.2■■■□□ 2.1
CDC42BPBQ9Y5S2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CDC42BPBQ9Y5S2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 AL031284.1-201ENST00000419297 478 ntBASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
CDC42BPBQ9Y5S2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms