Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF4Q9BRK5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SDF4Q9BRK5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 IRX1P1-201ENST00000438849 1838 ntBASIC21.73■■□□□ 1.07
SDF4Q9BRK5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 AC007613.1-201ENST00000572811 2597 ntBASIC21.73■■□□□ 1.07
SDF4Q9BRK5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 MFAP1P1-201ENST00000442257 1255 ntBASIC21.73■■□□□ 1.07
SDF4Q9BRK5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 FP475955.4-201ENST00000623131 1990 ntBASIC21.73■■□□□ 1.07
SDF4Q9BRK5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.73■■□□□ 1.07
SDF4Q9BRK5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 FAM210CP-201ENST00000445714 574 ntBASIC21.72■■□□□ 1.07
SDF4Q9BRK5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 AC009113.1-201ENST00000570267 2443 ntBASIC21.72■■□□□ 1.07
SDF4Q9BRK5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 KRT18P22-201ENST00000402024 1347 ntBASIC21.72■■□□□ 1.07
SDF4Q9BRK5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 AC096733.2-201ENST00000609937 1394 ntBASIC21.72■■□□□ 1.07
SDF4Q9BRK5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
SDF4Q9BRK5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 KRT8P41-201ENST00000533985 1514 ntBASIC21.71■■□□□ 1.07
SDF4Q9BRK5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.71■■□□□ 1.07
SDF4Q9BRK5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms