Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 AC106730.1-201ENST00000566722 1090 ntBASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 AL591684.3-201ENST00000605187 298 ntBASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 MIR7706-201ENST00000613747 67 ntBASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 KRT89P-201ENST00000620027 1478 ntBASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LINC00116Q8NCU8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 FEM1AP3-201ENST00000403722 1741 ntBASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 LINC01006-201ENST00000333319 2292 ntBASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 AC092865.5-201ENST00000545435 363 ntBASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.65■■□□□ 1.38
LINC00116Q8NCU8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LINC00116Q8NCU8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
LINC00116Q8NCU8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
LINC00116Q8NCU8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
LINC00116Q8NCU8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 AC018712.1-201ENST00000455767 687 ntBASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 AF186996.4-201ENST00000467186 377 ntBASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.64■■□□□ 1.37
LINC00116Q8NCU8 IRX1P1-201ENST00000438849 1838 ntBASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 AC092183.1-201ENST00000469884 875 ntBASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 RNPS1P1-201ENST00000507437 918 ntBASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 AC096582.2-201ENST00000510860 516 ntBASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.63■■□□□ 1.37
LINC00116Q8NCU8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 AC008608.2-201ENST00000606089 416 ntBASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LINC00116Q8NCU8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms