Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav9d-4A0A0G2JG37 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Trav9d-4A0A0G2JG37 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav9d-4A0A0G2JG37 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav9d-4A0A0G2JG37 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav9d-4A0A0G2JG37 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav9d-4A0A0G2JG37 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav9d-4A0A0G2JG37 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9d-4A0A0G2JG37 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gfra2-202ENSMUST00000227633 1480 ntBASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 H2-K2-201ENSMUST00000174250 1049 ntBASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav9d-4A0A0G2JG37 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms