Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 GNAS-203ENST00000306120 1878 ntBASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 AL162741.1-201ENST00000565563 1558 ntBASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.11■□□□□ 0.33
ERGIC3Q9Y282 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 AC008894.3-201ENST00000624324 3103 ntBASIC17.1■□□□□ 0.33
ERGIC3Q9Y282 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 AC134043.2-201ENST00000624206 2238 ntBASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms