Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Gm26039-201ENSMUST00000158152 144 ntBASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Gm44450-201ENSMUST00000199528 114 ntBASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Gm18421-201ENSMUST00000204122 625 ntBASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Gm45058-201ENSMUST00000205810 766 ntBASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afjQ8R1M2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
H2afjQ8R1M2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Gm27389-201ENSMUST00000183622 195 ntBASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Gm7889-201ENSMUST00000185591 958 ntBASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Gm43799-201ENSMUST00000201845 579 ntBASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Gm10566-201ENSMUST00000086739 996 ntBASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H2afjQ8R1M2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Gm29707-201ENSMUST00000196325 491 ntBASIC14.76□□□□□ -0.05
H2afjQ8R1M2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2afjQ8R1M2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afjQ8R1M2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms