Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 App-207ENSMUST00000227737 2827 ntBASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Smco3Q8BQM7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smco3Q8BQM7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smco3Q8BQM7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.15□□□□□ -0.31
Smco3Q8BQM7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smco3Q8BQM7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smco3Q8BQM7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smco3Q8BQM7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Gm18284-201ENSMUST00000172604 624 ntBASIC13.13□□□□□ -0.31
Smco3Q8BQM7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smco3Q8BQM7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Gm9731-201ENSMUST00000209480 747 ntBASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smco3Q8BQM7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms