Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HOXD8P13378 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HOXD8P13378 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HOXD8P13378 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXD8P13378 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXD8P13378 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXD8P13378 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 PCDHAC2-203ENST00000615316 3011 ntBASIC20.68■□□□□ 0.9
HOXD8P13378 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXD8P13378 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
HOXD8P13378 IGHGP-201ENST00000390555 1178 ntBASIC20.68■□□□□ 0.9
HOXD8P13378 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXD8P13378 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 AP003733.1-201ENST00000491725 852 ntBASIC20.68■□□□□ 0.9
HOXD8P13378 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXD8P13378 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXD8P13378 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXD8P13378 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXD8P13378 RN7SL510P-201ENST00000581311 263 ntBASIC20.68■□□□□ 0.9
HOXD8P13378 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXD8P13378 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXD8P13378 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXD8P13378 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
HOXD8P13378 KRT8P50-201ENST00000562022 1438 ntBASIC20.68■□□□□ 0.9
HOXD8P13378 KRT89P-201ENST00000620027 1478 ntBASIC20.68■□□□□ 0.9
HOXD8P13378 MTMR9LP-203ENST00000426597 1545 ntBASIC20.68■□□□□ 0.9
HOXD8P13378 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXD8P13378 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXD8P13378 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXD8P13378 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD8P13378 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HOXD8P13378 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD8P13378 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HOXD8P13378 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXD8P13378 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXD8P13378 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HOXD8P13378 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXD8P13378 UNC93B7-201ENST00000509439 705 ntBASIC20.67■□□□□ 0.9
HOXD8P13378 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.67■□□□□ 0.9
HOXD8P13378 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HOXD8P13378 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXD8P13378 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD8P13378 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXD8P13378 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXD8P13378 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD8P13378 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD8P13378 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXD8P13378 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXD8P13378 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD8P13378 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HOXD8P13378 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD8P13378 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD8P13378 TSPY19P-201ENST00000418461 509 ntBASIC20.66■□□□□ 0.9
HOXD8P13378 TSPY18P-201ENST00000441642 509 ntBASIC20.66■□□□□ 0.9
HOXD8P13378 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.66■□□□□ 0.9
HOXD8P13378 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXD8P13378 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD8P13378 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
HOXD8P13378 AC111152.3-201ENST00000569699 673 ntBASIC20.66■□□□□ 0.9
HOXD8P13378 AC090616.6-201ENST00000582640 721 ntBASIC20.66■□□□□ 0.9
HOXD8P13378 GPR32P1-201ENST00000601788 811 ntBASIC20.66■□□□□ 0.9
HOXD8P13378 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD8P13378 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.66■□□□□ 0.9
HOXD8P13378 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXD8P13378 AL357033.4-201ENST00000617703 1807 ntBASIC20.66■□□□□ 0.9
HOXD8P13378 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD8P13378 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD8P13378 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD8P13378 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXD8P13378 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXD8P13378 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXD8P13378 AC093484.2-201ENST00000580996 2166 ntBASIC20.66■□□□□ 0.9
HOXD8P13378 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXD8P13378 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXD8P13378 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HOXD8P13378 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXD8P13378 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXD8P13378 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD8P13378 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD8P13378 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD8P13378 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD8P13378 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD8P13378 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD8P13378 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD8P13378 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HOXD8P13378 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD8P13378 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXD8P13378 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXD8P13378 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms