Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Gm43072-201ENSMUST00000200283 1671 ntBASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Igkv3-5A0A140T8M6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Gm16061-201ENSMUST00000122167 857 ntBASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Gm18115-201ENSMUST00000221209 621 ntBASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 AC159205.6-201ENSMUST00000224935 887 ntBASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10□□□□□ -0.81
Igkv3-5A0A140T8M6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Gm13186-201ENSMUST00000118031 316 ntBASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Gm11539-201ENSMUST00000119837 557 ntBASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Igkv3-5A0A140T8M6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms