Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb3S4R1G7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb3S4R1G7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
H2afb3S4R1G7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
H2afb3S4R1G7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
H2afb3S4R1G7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.52■□□□□ 0.88
H2afb3S4R1G7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
H2afb3S4R1G7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb3S4R1G7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb3S4R1G7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
H2afb3S4R1G7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
H2afb3S4R1G7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb3S4R1G7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb3S4R1G7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb3S4R1G7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb3S4R1G7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
H2afb3S4R1G7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb3S4R1G7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb3S4R1G7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb3S4R1G7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.48■□□□□ 0.87
H2afb3S4R1G7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb3S4R1G7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb3S4R1G7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb3S4R1G7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.47■□□□□ 0.87
H2afb3S4R1G7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb3S4R1G7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb3S4R1G7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb3S4R1G7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
H2afb3S4R1G7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.46■□□□□ 0.87
H2afb3S4R1G7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.46■□□□□ 0.87
H2afb3S4R1G7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb3S4R1G7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
H2afb3S4R1G7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
H2afb3S4R1G7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.45■□□□□ 0.86
H2afb3S4R1G7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb3S4R1G7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb3S4R1G7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb3S4R1G7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb3S4R1G7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb3S4R1G7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb3S4R1G7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb3S4R1G7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb3S4R1G7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb3S4R1G7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.43■□□□□ 0.86
H2afb3S4R1G7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.42■□□□□ 0.86
H2afb3S4R1G7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb3S4R1G7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb3S4R1G7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb3S4R1G7 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.42■□□□□ 0.86
H2afb3S4R1G7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb3S4R1G7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.41■□□□□ 0.86
H2afb3S4R1G7 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.41■□□□□ 0.86
H2afb3S4R1G7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb3S4R1G7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
H2afb3S4R1G7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb3S4R1G7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb3S4R1G7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.4■□□□□ 0.86
H2afb3S4R1G7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb3S4R1G7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
H2afb3S4R1G7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2afb3S4R1G7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2afb3S4R1G7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb3S4R1G7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb3S4R1G7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb3S4R1G7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
H2afb3S4R1G7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb3S4R1G7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb3S4R1G7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb3S4R1G7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb3S4R1G7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb3S4R1G7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb3S4R1G7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.36■□□□□ 0.85
H2afb3S4R1G7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.36■□□□□ 0.85
H2afb3S4R1G7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb3S4R1G7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb3S4R1G7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb3S4R1G7 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.35■□□□□ 0.85
H2afb3S4R1G7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
H2afb3S4R1G7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
H2afb3S4R1G7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb3S4R1G7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb3S4R1G7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb3S4R1G7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb3S4R1G7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb3S4R1G7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
H2afb3S4R1G7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afb3S4R1G7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afb3S4R1G7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H2afb3S4R1G7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H2afb3S4R1G7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2afb3S4R1G7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb3S4R1G7 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.32■□□□□ 0.84
H2afb3S4R1G7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.32■□□□□ 0.84
H2afb3S4R1G7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.31■□□□□ 0.84
H2afb3S4R1G7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb3S4R1G7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb3S4R1G7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb3S4R1G7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb3S4R1G7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb3S4R1G7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms