Protein–RNA interactions for Protein: Q9Z0E0

Ncdn, Neurochondrin, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcdnQ9Z0E0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
NcdnQ9Z0E0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NcdnQ9Z0E0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NcdnQ9Z0E0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NcdnQ9Z0E0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
NcdnQ9Z0E0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NcdnQ9Z0E0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NcdnQ9Z0E0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.2■■□□□ 1.3
NcdnQ9Z0E0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.2■■□□□ 1.3
NcdnQ9Z0E0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.2■■□□□ 1.3
NcdnQ9Z0E0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NcdnQ9Z0E0 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.19■■□□□ 1.3
NcdnQ9Z0E0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NcdnQ9Z0E0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NcdnQ9Z0E0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NcdnQ9Z0E0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NcdnQ9Z0E0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NcdnQ9Z0E0 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.18■■□□□ 1.3
NcdnQ9Z0E0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
NcdnQ9Z0E0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NcdnQ9Z0E0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NcdnQ9Z0E0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NcdnQ9Z0E0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NcdnQ9Z0E0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.17■■□□□ 1.3
NcdnQ9Z0E0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NcdnQ9Z0E0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NcdnQ9Z0E0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NcdnQ9Z0E0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NcdnQ9Z0E0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.16■■□□□ 1.3
NcdnQ9Z0E0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NcdnQ9Z0E0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NcdnQ9Z0E0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NcdnQ9Z0E0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NcdnQ9Z0E0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NcdnQ9Z0E0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NcdnQ9Z0E0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.13■■□□□ 1.29
NcdnQ9Z0E0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NcdnQ9Z0E0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NcdnQ9Z0E0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.11■■□□□ 1.29
NcdnQ9Z0E0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NcdnQ9Z0E0 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.11■■□□□ 1.29
NcdnQ9Z0E0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NcdnQ9Z0E0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NcdnQ9Z0E0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcdnQ9Z0E0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcdnQ9Z0E0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcdnQ9Z0E0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcdnQ9Z0E0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.09■■□□□ 1.29
NcdnQ9Z0E0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
NcdnQ9Z0E0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
NcdnQ9Z0E0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NcdnQ9Z0E0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.08■■□□□ 1.29
NcdnQ9Z0E0 Gm43566-201ENSMUST00000196851 808 ntBASIC23.08■■□□□ 1.29
NcdnQ9Z0E0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
NcdnQ9Z0E0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NcdnQ9Z0E0 Zxda-201ENSMUST00000117281 2621 ntBASIC23.07■■□□□ 1.28
NcdnQ9Z0E0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NcdnQ9Z0E0 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.07■■□□□ 1.28
NcdnQ9Z0E0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
NcdnQ9Z0E0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.07■■□□□ 1.28
NcdnQ9Z0E0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
NcdnQ9Z0E0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NcdnQ9Z0E0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.06■■□□□ 1.28
NcdnQ9Z0E0 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.06■■□□□ 1.28
NcdnQ9Z0E0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NcdnQ9Z0E0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
NcdnQ9Z0E0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NcdnQ9Z0E0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NcdnQ9Z0E0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NcdnQ9Z0E0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NcdnQ9Z0E0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NcdnQ9Z0E0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.05■■□□□ 1.28
NcdnQ9Z0E0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
NcdnQ9Z0E0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NcdnQ9Z0E0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
NcdnQ9Z0E0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.03■■□□□ 1.28
NcdnQ9Z0E0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.03■■□□□ 1.28
NcdnQ9Z0E0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.03■■□□□ 1.28
NcdnQ9Z0E0 Terc-201ENSMUST00000082862 423 ntBASIC23.03■■□□□ 1.28
NcdnQ9Z0E0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NcdnQ9Z0E0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NcdnQ9Z0E0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NcdnQ9Z0E0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
NcdnQ9Z0E0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NcdnQ9Z0E0 Gm13238-201ENSMUST00000117655 780 ntBASIC23.02■■□□□ 1.28
NcdnQ9Z0E0 Gm45444-201ENSMUST00000211394 898 ntBASIC23.01■■□□□ 1.27
NcdnQ9Z0E0 Gm9959-201ENSMUST00000068277 390 ntBASIC23.01■■□□□ 1.27
NcdnQ9Z0E0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NcdnQ9Z0E0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NcdnQ9Z0E0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
NcdnQ9Z0E0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NcdnQ9Z0E0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.99■■□□□ 1.27
NcdnQ9Z0E0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NcdnQ9Z0E0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NcdnQ9Z0E0 Serp2-204ENSMUST00000228055 705 ntBASIC22.98■■□□□ 1.27
NcdnQ9Z0E0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NcdnQ9Z0E0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
NcdnQ9Z0E0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NcdnQ9Z0E0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NcdnQ9Z0E0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms