Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Cx3cr1Q9Z0D9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cr1Q9Z0D9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Cx3cr1Q9Z0D9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cx3cr1Q9Z0D9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cx3cr1Q9Z0D9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cx3cr1Q9Z0D9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cx3cr1Q9Z0D9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cx3cr1Q9Z0D9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.39■□□□□ 0.69
Cx3cr1Q9Z0D9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cx3cr1Q9Z0D9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.39■□□□□ 0.69
Cx3cr1Q9Z0D9 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.39■□□□□ 0.69
Cx3cr1Q9Z0D9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cx3cr1Q9Z0D9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cx3cr1Q9Z0D9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cx3cr1Q9Z0D9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cx3cr1Q9Z0D9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cx3cr1Q9Z0D9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cx3cr1Q9Z0D9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cx3cr1Q9Z0D9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cx3cr1Q9Z0D9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cx3cr1Q9Z0D9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cx3cr1Q9Z0D9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cx3cr1Q9Z0D9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cx3cr1Q9Z0D9 Gm30023-201ENSMUST00000197970 889 ntBASIC19.37■□□□□ 0.69
Cx3cr1Q9Z0D9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cx3cr1Q9Z0D9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cx3cr1Q9Z0D9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cx3cr1Q9Z0D9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cx3cr1Q9Z0D9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cx3cr1Q9Z0D9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cx3cr1Q9Z0D9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cx3cr1Q9Z0D9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cx3cr1Q9Z0D9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cr1Q9Z0D9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cr1Q9Z0D9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cr1Q9Z0D9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cx3cr1Q9Z0D9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cx3cr1Q9Z0D9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cx3cr1Q9Z0D9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cx3cr1Q9Z0D9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cx3cr1Q9Z0D9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cx3cr1Q9Z0D9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cx3cr1Q9Z0D9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.32■□□□□ 0.68
Cx3cr1Q9Z0D9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cx3cr1Q9Z0D9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.31■□□□□ 0.68
Cx3cr1Q9Z0D9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cx3cr1Q9Z0D9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cx3cr1Q9Z0D9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cx3cr1Q9Z0D9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cx3cr1Q9Z0D9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cx3cr1Q9Z0D9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.3■□□□□ 0.68
Cx3cr1Q9Z0D9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cx3cr1Q9Z0D9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cx3cr1Q9Z0D9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.29■□□□□ 0.68
Cx3cr1Q9Z0D9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.29■□□□□ 0.68
Cx3cr1Q9Z0D9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Cx3cr1Q9Z0D9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cr1Q9Z0D9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cr1Q9Z0D9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cr1Q9Z0D9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cx3cr1Q9Z0D9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cx3cr1Q9Z0D9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.27■□□□□ 0.68
Cx3cr1Q9Z0D9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cx3cr1Q9Z0D9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cx3cr1Q9Z0D9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cx3cr1Q9Z0D9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.26■□□□□ 0.67
Cx3cr1Q9Z0D9 Zfp131-205ENSMUST00000223812 663 ntBASIC19.26■□□□□ 0.67
Cx3cr1Q9Z0D9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Cx3cr1Q9Z0D9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cx3cr1Q9Z0D9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cx3cr1Q9Z0D9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cx3cr1Q9Z0D9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cx3cr1Q9Z0D9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cx3cr1Q9Z0D9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cx3cr1Q9Z0D9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cx3cr1Q9Z0D9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cx3cr1Q9Z0D9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cx3cr1Q9Z0D9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cx3cr1Q9Z0D9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cx3cr1Q9Z0D9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.24■□□□□ 0.67
Cx3cr1Q9Z0D9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cx3cr1Q9Z0D9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cx3cr1Q9Z0D9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cx3cr1Q9Z0D9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cx3cr1Q9Z0D9 Gm24970-201ENSMUST00000175582 82 ntBASIC19.23■□□□□ 0.67
Cx3cr1Q9Z0D9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cx3cr1Q9Z0D9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.23■□□□□ 0.67
Cx3cr1Q9Z0D9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cx3cr1Q9Z0D9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Cx3cr1Q9Z0D9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Cx3cr1Q9Z0D9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cx3cr1Q9Z0D9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cx3cr1Q9Z0D9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cx3cr1Q9Z0D9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cx3cr1Q9Z0D9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cx3cr1Q9Z0D9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cx3cr1Q9Z0D9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cx3cr1Q9Z0D9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cx3cr1Q9Z0D9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms