Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.35■■□□□ 1.01
Rita1Q9D1H0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rita1Q9D1H0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.34■■□□□ 1.01
Rita1Q9D1H0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rita1Q9D1H0 Scarna2-201ENSMUST00000157560 414 ntBASIC21.34■■□□□ 1.01
Rita1Q9D1H0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.34■■□□□ 1.01
Rita1Q9D1H0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rita1Q9D1H0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rita1Q9D1H0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rita1Q9D1H0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rita1Q9D1H0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rita1Q9D1H0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rita1Q9D1H0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.33■■□□□ 1
Rita1Q9D1H0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Rita1Q9D1H0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rita1Q9D1H0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rita1Q9D1H0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Rita1Q9D1H0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.32■■□□□ 1
Rita1Q9D1H0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.31■■□□□ 1
Rita1Q9D1H0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rita1Q9D1H0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rita1Q9D1H0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rita1Q9D1H0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rita1Q9D1H0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rita1Q9D1H0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rita1Q9D1H0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rita1Q9D1H0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rita1Q9D1H0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
Rita1Q9D1H0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rita1Q9D1H0 Gm9812-201ENSMUST00000061934 968 ntBASIC21.29■■□□□ 1
Rita1Q9D1H0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rita1Q9D1H0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rita1Q9D1H0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.29■■□□□ 1
Rita1Q9D1H0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rita1Q9D1H0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rita1Q9D1H0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.28■■□□□ 1
Rita1Q9D1H0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.28■■□□□ 1
Rita1Q9D1H0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rita1Q9D1H0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.28■■□□□ 1
Rita1Q9D1H0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.28■■□□□ 1
Rita1Q9D1H0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rita1Q9D1H0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rita1Q9D1H0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rita1Q9D1H0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rita1Q9D1H0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rita1Q9D1H0 Gm16437-201ENSMUST00000025669 507 ntBASIC21.27■■□□□ 1
Rita1Q9D1H0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.26■□□□□ 0.99
Rita1Q9D1H0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rita1Q9D1H0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rita1Q9D1H0 Gm9806-201ENSMUST00000051080 552 ntBASIC21.26■□□□□ 0.99
Rita1Q9D1H0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rita1Q9D1H0 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.25■□□□□ 0.99
Rita1Q9D1H0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rita1Q9D1H0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rita1Q9D1H0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rita1Q9D1H0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rita1Q9D1H0 Mir6538-201ENSMUST00000183713 110 ntBASIC21.23■□□□□ 0.99
Rita1Q9D1H0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rita1Q9D1H0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Rita1Q9D1H0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rita1Q9D1H0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rita1Q9D1H0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rita1Q9D1H0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rita1Q9D1H0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rita1Q9D1H0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rita1Q9D1H0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Rita1Q9D1H0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rita1Q9D1H0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rita1Q9D1H0 Gm11687-201ENSMUST00000118911 886 ntBASIC21.2■□□□□ 0.98
Rita1Q9D1H0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rita1Q9D1H0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rita1Q9D1H0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rita1Q9D1H0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rita1Q9D1H0 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.19■□□□□ 0.98
Rita1Q9D1H0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rita1Q9D1H0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rita1Q9D1H0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rita1Q9D1H0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rita1Q9D1H0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rita1Q9D1H0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rita1Q9D1H0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rita1Q9D1H0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rita1Q9D1H0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Rita1Q9D1H0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rita1Q9D1H0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.16■□□□□ 0.98
Rita1Q9D1H0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rita1Q9D1H0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rita1Q9D1H0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rita1Q9D1H0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Rita1Q9D1H0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rita1Q9D1H0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.14■□□□□ 0.97
Rita1Q9D1H0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rita1Q9D1H0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rita1Q9D1H0 Terc-201ENSMUST00000082862 423 ntBASIC21.13■□□□□ 0.97
Rita1Q9D1H0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rita1Q9D1H0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rita1Q9D1H0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rita1Q9D1H0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rita1Q9D1H0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rita1Q9D1H0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms